Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909310.1_cds_XP_016459537.1_53057
CDS Infomation

[gene=LOC107783079] [db_xref=GeneID:107783079] [protein=lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like] [protein_id=XP_016459537.1] [location=join(81339..81533,82306..82452,83147..83272,83657..84030,84556..84803,84976..85064,86652..86879,86999..87112)] [gbkey=CDS]
Sequence

ATGATTTGCCGGAAAATTAATCAGGGTAAGCTCCGGAATTCCTTCCGGCAGAGTATTTGC
CGGTGGTTTCAGTCTTCTGTTGCACCGGTGGCAGCTCCGATGACACCTGTTAGTACTGTA
AGCAGCAGTGGCAAGAAAATTCAGTCTCAACTTCATTTCTTTGGAAACTATACGACACCG
TTTTGCTCATTTAAGTCGAATGTTTCCTTTCCTCTGAGAGGGTGTAGTTTTTCAACTCAA
GCTGCATTGGATCTTTCTACTGGTGGGGTAATTGATGTACCTTTGGCGCAAACTGGTGAA
GGCATTGCTGAATGTGAACTTCTCAAATGGTTTGTTCATGAGGGGGACCAGGTTGAAGAA
TTTCAACCTCTTTGTGAAGTTCAGAGTGACAAGGCAACCATTGAAATAACAAGTCGTTAC
AAAGGAAAAATTTCTCAAATTCTTCATGTTCCCGGCAACATTGTAAAGGTTGGAGAAACA
CTTTTGAAGATCGCCGTTGATGACATTCCTGAGCCTGCTGAGACTTCTGATGCTTCAGAA
AAGATGACATCGCTGGACTCTGATTTTATTGGCTCAAGTGATATCAGTTCCGTGCCCGAA
AAATCCAAGATTGATGGAGTGTCATCTACACCTGCTGTCCGCAATCTTGCAAAGCAGTAT
GGTTTAGACATAAATGATGTGCCTGGAACTGGTAAAGATGGAAGGATACTTAAAGAGGAT
GTTACAAATTATGCAATGCAAAAAGGACTAATTAATGAAGCACTAGAATGTGCACAACAA
AAACATTCAGAGGTTTCATCTCTCATTGGAGGGGGATATGAAGATAAGACACTTCAGCTA
AGGGGATACCAGCGTGCCATGGTTAAGTCAATGACATTAGCTGCGAAAATTCCACATTTT
TATTTTATAGAAGAGATGAATTGCGATGCACTTGTGGAGCTCAAAAAATCATTCCAGAAT
GAGAATTCTGATCTGGAGATCAAGCACACTTTCCTTCCTGTCCTAATAAAATCACTTTCC
ATGGCTTTAACTACTCATCCCATGCTAAATAGTTGCTTCAGTGAGGAATCCTATGAGGTC
ATCCTAAAAGGGTCCCACAACATTGGAATAGCAATGGCTACTCCAAATGGTTTGGTTGTT
CCAAACATAAAAAATGTTCAGTCTCTCTCAATCTTGGAGATAACAAAGGAACTGTCACGA
CTGCAGAAATTGGCTAAGATAAACAAGCTTACTCCTGATGATATATCAGGGTCAACTATT
ACTCTAAGCAATATTGGAGGAATCGGTGGAAAGTTTGGTTCCCCACTTATAAATTCACCT
GAAGTTGCCATCATAGGATTTGGCCGGATTCAGAAAATTGCACAGTTTGCTGAAGATGGG
GATGTATATCCTGCATCAGTCATGACGATAAATATAGGTGCAGATCATAGAGTTCTTGAC
GGAGCAACTGTTGCGAGGTTCTGCAATGACTGGAAAAAATTTGTTGAAAAGCCAGACCTC
CTGCTGTTGCACACAAGATGA

Peptide Sequence

PEP ID

XP_016459537.1
PEP Infomation

PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like [Nicotiana tabacum]
Sequence

MICRKINQGKLRNSFRQSICRWFQSSVAPVAAPMTPVSTVSSSGKKIQSQLHFFGNYTTP
FCSFKSNVSFPLRGCSFSTQAALDLSTGGVIDVPLAQTGEGIAECELLKWFVHEGDQVEE
FQPLCEVQSDKATIEITSRYKGKISQILHVPGNIVKVGETLLKIAVDDIPEPAETSDASE
KMTSLDSDFIGSSDISSVPEKSKIDGVSSTPAVRNLAKQYGLDINDVPGTGKDGRILKED
VTNYAMQKGLINEALECAQQKHSEVSSLIGGGYEDKTLQLRGYQRAMVKSMTLAAKIPHF
YFIEEMNCDALVELKKSFQNENSDLEIKHTFLPVLIKSLSMALTTHPMLNSCFSEESYEV
ILKGSHNIGIAMATPNGLVVPNIKNVQSLSILEITKELSRLQKLAKINKLTPDDISGSTI
TLSNIGGIGGKFGSPLINSPEVAIIGFGRIQKIAQFAEDGDVYPASVMTINIGADHRVLD
GATVARFCNDWKKFVEKPDLLLLHTR

Transcript Sequence

Gene sequence data has not been registered.